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encyclopedia of Rare Disease Annotation for Precision Medicine



   arrhythmogenic right ventricular cardiomyopathy
  

Disease ID 439
Disease arrhythmogenic right ventricular cardiomyopathy
Definition
A congenital cardiomyopathy that is characterized by infiltration of adipose and fibrous tissue into the RIGHT VENTRICLE wall and loss of myocardial cells. Primary injuries usually are at the free wall of right ventricular and right atria resulting in ventricular and supraventricular arrhythmias.
Synonym
arrhythmogenic right ventricular cardiomyopathy (disorder)
arrhythmogenic right ventricular cardiomyopathy dysplasia
arrhythmogenic right ventricular cardiomyopathy-dysplasia
arrhythmogenic right ventricular dysplasia
arrhythmogenic right ventricular dysplasia (disorder)
arrhythmogenic right ventricular dysplasia [disease/finding]
arrhythmogenic right ventricular dysplasia-cardiomyopathy
arrhythmogenic rvd
arrythmogenic right ventricular dysplasia
arrythmogenic right ventricular dysplasia (disorder)
arvd
arvd-c
right ventricular dysplasia
right ventricular dysplasia, arrhythmogenic
ventricular dysplasia, right, arrhythmogenic
Orphanet
DOID
UMLS
C0349788
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:16)
C0006384  |  bundle branch block  |  3
C0085615  |  right bundle branch block  |  3
C0878544  |  cardiomyopathy  |  2
C0026848  |  myopathy  |  2
C0027059  |  myocarditis  |  2
C0002170  |  alopecia  |  1
C0007193  |  dilated cardiomyopathy  |  1
C1561644  |  chronic kidney disease (ckd)  |  1
C0041341  |  tuberous sclerosis  |  1
C0040053  |  thrombosis  |  1
C0022658  |  kidney disease  |  1
C0022661  |  chronic kidney disease  |  1
C0018801  |  heart failure  |  1
C0003467  |  anxiety  |  1
C0036421  |  systemic sclerosis  |  1
C0087086  |  thrombi  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:15)
3728  |  JUP  |  GHR;UNIPROT
11155  |  LDB3  |  UNIPROT
9531  |  BAG3  |  CLINVAR
1824  |  DSC2  |  CLINVAR;GHR;UNIPROT
1829  |  DSG2  |  CLINVAR;GHR;UNIPROT
7043  |  TGFB3  |  GHR;UNIPROT
3757  |  KCNH2  |  CLINVAR
4000  |  LMNA  |  CLINVAR
6331  |  SCN5A  |  CLINVAR
1832  |  DSP  |  CLINVAR;GHR;UNIPROT
6262  |  RYR2  |  GHR;UNIPROT
125972  |  CALR3  |  CLINVAR
88  |  ACTN2  |  UNIPROT
5318  |  PKP2  |  CLINVAR;GHR;UNIPROT
79188  |  TMEM43  |  CLINVAR;GHR;UNIPROT
Inferring Gene
Entrez_id | Symbol | Resource(Total Genes:6)
1824  |  DSC2  |  CIPHER
1829  |  DSG2  |  CIPHER
1832  |  DSP  |  CIPHER
3728  |  JUP  |  CIPHER
57546  |  PDP2  |  CIPHER
5318  |  PKP2  |  CIPHER
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:79)
34  |  ACADM  |  2.448  |  DISEASES
87  |  ACTN1  |  1.675  |  DISEASES
88  |  ACTN2  |  1.762  |  DISEASES
287  |  ANK2  |  1.412  |  DISEASES
27063  |  ANKRD1  |  1.797  |  DISEASES
722  |  C4BPA  |  1.417  |  DISEASES
779  |  CACNA1S  |  1.205  |  DISEASES
23066  |  CAND2  |  1.453  |  DISEASES
9560  |  CCL4L2  |  1.014  |  DISEASES
23607  |  CD2AP  |  3.181  |  DISEASES
10659  |  CELF2  |  1.817  |  DISEASES
1490  |  CTGF  |  1.518  |  DISEASES
29119  |  CTNNA3  |  3.904  |  DISEASES
1499  |  CTNNB1  |  2.714  |  DISEASES
57703  |  CWC22  |  1.084  |  DISEASES
1674  |  DES  |  3.391  |  DISEASES
1756  |  DMD  |  1.829  |  DISEASES
1804  |  DPP6  |  1.521  |  DISEASES
1825  |  DSC3  |  5.53  |  DISEASES
147409  |  DSG4  |  1.363  |  DISEASES
1832  |  DSP  |  6.68  |  DISEASES
143241  |  DYDC1  |  3.847  |  DISEASES
2010  |  EMD  |  1.502  |  DISEASES
2103  |  ESRRB  |  1.485  |  DISEASES
84293  |  FAM213A  |  2.465  |  DISEASES
2200  |  FBN1  |  1.129  |  DISEASES
2280  |  FKBP1A  |  1.039  |  DISEASES
2281  |  FKBP1B  |  4.048  |  DISEASES
642489  |  FKBP1C  |  1.135  |  DISEASES
2298  |  FOXD4  |  2.734  |  DISEASES
55691  |  FRMD4A  |  2.34  |  DISEASES
10052  |  GJC1  |  2.327  |  DISEASES
259307  |  IL4I1  |  2.647  |  DISEASES
3664  |  IRF6  |  3.205  |  DISEASES
145501  |  ISM2  |  3.214  |  DISEASES
3775  |  KCNK1  |  1.959  |  DISEASES
11155  |  LDB3  |  2.541  |  DISEASES
7044  |  LEFTY2  |  1.606  |  DISEASES
4000  |  LMNA  |  2.556  |  DISEASES
4143  |  MAT1A  |  1.399  |  DISEASES
4205  |  MEF2A  |  1.704  |  DISEASES
4208  |  MEF2C  |  2.344  |  DISEASES
116534  |  MRGPRE  |  1.406  |  DISEASES
4519  |  MT-CYB  |  2.359  |  DISEASES
9788  |  MTSS1  |  1.184  |  DISEASES
4607  |  MYBPC3  |  1.586  |  DISEASES
4625  |  MYH7  |  2.482  |  DISEASES
114803  |  MYSM1  |  2.111  |  DISEASES
1482  |  NKX2-5  |  2.343  |  DISEASES
103752588  |  PACERR  |  2.119  |  DISEASES
118425  |  PCAT4  |  1.306  |  DISEASES
5137  |  PDE1C  |  2.151  |  DISEASES
64065  |  PERP  |  2.336  |  DISEASES
8502  |  PKP4  |  3.7  |  DISEASES
219348  |  PLAC9  |  3.601  |  DISEASES
5350  |  PLN  |  2.087  |  DISEASES
282996  |  RBM20  |  2.127  |  DISEASES
79651  |  RHBDF2  |  2.02  |  DISEASES
3921  |  RPSA  |  1.152  |  DISEASES
6261  |  RYR1  |  3.261  |  DISEASES
6262  |  RYR2  |  5.631  |  DISEASES
6263  |  RYR3  |  1.644  |  DISEASES
6295  |  SAG  |  1.206  |  DISEASES
6331  |  SCN5A  |  4.245  |  DISEASES
6332  |  SCN7A  |  2.435  |  DISEASES
653509  |  SFTPA1  |  1.313  |  DISEASES
729238  |  SFTPA2  |  1.106  |  DISEASES
387694  |  SH2D4B  |  3.847  |  DISEASES
788  |  SLC25A20  |  1.284  |  DISEASES
6546  |  SLC8A1  |  1.221  |  DISEASES
80195  |  TMEM254  |  3.847  |  DISEASES
7137  |  TNNI3  |  1.862  |  DISEASES
7139  |  TNNT2  |  1.442  |  DISEASES
81619  |  TSPAN14  |  3.146  |  DISEASES
7273  |  TTN  |  3.597  |  DISEASES
165904  |  XIRP1  |  1.864  |  DISEASES
219654  |  ZCCHC24  |  3.531  |  DISEASES
57178  |  ZMIZ1  |  1.789  |  DISEASES
100128252  |  ZNF667-AS1  |  1.558  |  DISEASES
Locus(Waiting for update.)
Disease ID 439
Disease arrhythmogenic right ventricular cardiomyopathy
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:24)
HP:0011675  |  Arrhythmias  |  19
HP:0004308  |  Ventricular arrhythmia  |  11
HP:0004756  |  Ventricular tachycardia  |  9
HP:0001649  |  Tachycardia  |  7
HP:0001645  |  Sudden cardiac death  |  5
HP:0011710  |  Bundle-branch block  |  3
HP:0011712  |  Right bundle-branch block  |  3
HP:0012819  |  Myocarditis  |  2
HP:0001279  |  Syncope  |  2
HP:0001638  |  Cardiomyopathy  |  2
HP:0003198  |  Myopathic changes  |  2
HP:0001712  |  Left ventricular hypertrophy  |  1
HP:0012622  |  Chronic kidney disease  |  1
HP:0001714  |  Ventricular hypertrophy  |  1
HP:0000739  |  Anxiety  |  1
HP:0001631  |  Atria septal defect  |  1
HP:0001644  |  Congestive cardiomyopathy  |  1
HP:0001708  |  Impaired right ventricular function  |  1
HP:0001635  |  Congestive heart failure  |  1
HP:0001962  |  Palpitations  |  1
HP:0000961  |  Cyanosis  |  1
HP:0001596  |  Hair loss  |  1
HP:0002459  |  Dysautonomia  |  1
HP:0003715  |  Myofibrillar changes  |  1
Disease ID 439
Disease arrhythmogenic right ventricular cardiomyopathy
Manually Symptom
UMLS  | Name(Total Manually Symptoms:5)
C2712322  |  tachycardia
C2347963  |  right ventricular outflow tract tachycardia
C0264716  |  chronic heart failure
C0018801  |  heart failure
C0013575  |  ectodermal dysplasia
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:2)
C0039231  |  tachycardia  |  6
C0235527  |  right ventricular failure  |  1
Manually Genotype(Total Manually Genotypes:1)
Gene Mutation DOI Article Title
DSPNM_004415.2:c.269A>G, NP_004406.2:p.Gln90Argdoi:10.1038/gim.2015.26Frequency and spectrum of actionable pathogenic secondary findings in 196 Korean exomes
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:35)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs111517471NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232796108CA,G,T
rs121434421258579105318PKP2umls:C0349788BeFreeThe introduction of the PKP2 R735X mutation into mice resulted in an exercise-dependent ARVC phenotype.0.1632201852015PKP21232802499GA
rs121912998NA1832DSPumls:C0349788CLINVARNA0.141159991NADSP;LOC10192807667542003GA
rs121913012NA1829DSG2umls:C0349788CLINVARNA0.136992555NADSG21831524865GA
rs121913013NA1829DSG2umls:C0349788CLINVARNA0.136992555NADSG21831519887GA
rs142951029NA125972CALR3umls:C0349788CLINVARNA0.12NACALR31916490519TC
rs149930872213780095318PKP2umls:C0349788BeFreeThe PKP2 heterozygous p.Arg490Trp variant was identified in two unrelated ARVC probands (absent from 470 controls).0.1632201852011PKP21232843224GA,T
rs150339369NA1832DSPumls:C0349788CLINVARNA0.141159991NADSP67574781CT
rs193922639230717256445SGCGumls:C0349788BeFreeIn contrast, the variants DSG2-p.K294E and -p.V392I, which have an arguable impact on ARVC pathogenesis and are predicted to be benign, did not show functional differences to the wild-type protein in our study.0.0002714422012DSG21831531146GA
rs193922669NA1832DSPumls:C0349788CLINVARNA0.141159991NADSP67582817GA
rs193922672NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232841103CT
rs193922673NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232821473CT
rs193922674NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232802557CG
rs193922706NA79188TMEM43umls:C0349788CLINVARNA0.127262917NATMEM43314141742CG,T
rs199473025NA3757KCNH2umls:C0349788CLINVARNA0.12NAKCNH27150947347GA
rs199473068NA6331SCN5Aumls:C0349788CLINVARNA0.120814326NASCN5A338620886GC,A
rs201564919NA1829DSG2umls:C0349788CLINVARNA0.136992555NADSG21831541225GA
rs267607499208292281674DESumls:C0349788BeFreeDe novo desmin-mutation N116S is associated with arrhythmogenic right ventricular cardiomyopathy.0.0010857672010DES2219418809AG
rs34738426NA1832DSPumls:C0349788CLINVARNA0.141159991NADSP67581514GT
rs367752002NA1832DSPumls:C0349788CLINVARNA0.141159991NADSP67576347AC,G
rs372827156NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232850907GA
rs374875442222148981829DSG2umls:C0349788BeFreeWe identified 3 cases of compound heterozygosities (Case 1: DSG2 S194L and DSG2 R292C; Case 2: PKP2 2489+1G>A and PKP2 D812N; Case 3: PKP2 M565R and PKP2 D812N) and 1 of digenic heterozygosity (Case 4: PKP2 1728_1729insGATG and DSG2 R292C) among the definite ARVC patients.0.1369925552012DSG21831522140CT
rs375679311NA1829DSG2umls:C0349788CLINVARNA0.136992555NADSG21831536256AG
rs377272752NA1824DSC2umls:C0349788CLINVARNA0.138088254NADSC21831069032TCC-
rs397514506NA9531BAG3umls:C0349788CLINVARNA0.12NABAG310119672399CT
rs397516994NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232850765CG
rs397516997NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232896581CTGT-
rs397517906NA4000LMNAumls:C0349788CLINVARNA0.120271442NALMNA1156134890CT
rs637507432245857079188TMEM43umls:C0349788BeFreeFunctional effects of the TMEM43 Ser358Leu mutation in the pathogenesis of arrhythmogenic right ventricular cardiomyopathy.0.1272629172012TMEM43314141665CT
rs637507432272572579188TMEM43umls:C0349788BeFreeThe natural history of a genetic subtype of arrhythmogenic right ventricular cardiomyopathy caused by a p.S358L mutation in TMEM43.0.1272629172012TMEM43314141665CT
rs637507432534325679188TMEM43umls:C0349788BeFreeTMEM43 mutation p.S358L alters intercalated disc protein expression and reduces conduction velocity in arrhythmogenic right ventricular cardiomyopathy.0.1272629172014TMEM43314141665CT
rs63750743NA79188TMEM43umls:C0349788CLINVARNA0.127262917NATMEM43314141665CT
rs730880180NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232869018AG
rs786205353NA5318PKP2umls:C0349788CLINVARNA0.163220185NAPKP21232877900-C
rs786205360NA1824DSC2umls:C0349788CLINVARNA0.138088254NADSC21831069036CCT-
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 439
Disease arrhythmogenic right ventricular cardiomyopathy
Case(Waiting for update.)